Publications
2023
Low-dose Bisphenol A exposure alters the functionality and cellular environment in a human cardiomyocyte model
Federica Lamberto,
Bachuki Shashikadze,
Radwa Elkhateib,
Salvo Danilo Lombardo,
Alex Horánszky,
Andrea Balogh,
Kornél Kistamás,
Melinda Zana,
Jörg Menche,
Thomas Fröhlich,
András Dinnyés.
Environ Pollut. 2023 Oct 15;335:122359. doi: 10.1016/j.envpol.2023.122359. Epub 2023 Aug 9.
2023
Maternal hyperglycemia induces alterations in hepatic amino acid, glucose and lipid metabolism of neonatal offspring: Multi-omics insights from a diabetic pig model
Bachuki Shashikadze,
Libera Valla,
Salvo Danilo Lombardo,
Cornelia Prehn,
Mark Haid,
Fabien Riols,
Jan Bernd Stöckl,
Radwa Elkhateib,
Simone Renner,
Birgit Rathkolb,
Jörg Menche,
Martin Hrabĕ de Angelis,
Eckhard Wolf,
Elisabeth Kemter,
Thomas Fröhlich.
Mol Metab. 2023 Sep;75:101768. doi: 10.1016/j.molmet.2023.101768. Epub 2023 Jul 4.
2023
Assessment of community efforts to advance network-based prediction of protein-protein interactions
Xu-Wen Wang,
Lorenzo Madeddu,
Kerstin Spirohn,
Leonardo Martini,
Adriano Fazzone,
Luca Becchetti,
Thomas P Wytock,
István A Kovács,
Olivér M Balogh,
Bettina Benczik,
Mátyás Pétervári,
Bence Ágg,
Péter Ferdinandy,
Loan Vulliard,
Jörg Menche,
Stefania Colonnese,
Manuela Petti,
Gaetano Scarano,
Francesca Cuomo,
Tong Hao,
Florent Laval,
Luc Willems,
Jean-Claude Twizere,
Marc Vidal,
Michael A Calderwood,
Enrico Petrillo,
Albert-László Barabási,
Edwin K Silverman,
Joseph Loscalzo,
Paola Velardi,
Yang-Yu Liu.
Nat Commun. 2023 Mar 22;14(1):1582. doi: 10.1038/s41467-023-37079-7.
2023
Proline and glucose metabolic reprogramming supports vascular endothelial and medial biomass in pulmonary arterial hypertension
Bradley M Wertheim,
Rui-Sheng Wang,
Christelle Guillermier,
Christiane Vr Hütter,
William M Oldham,
Jörg Menche,
Matthew L Steinhauser,
Bradley A Maron.
JCI Insight. 2023 Feb 22;8(4):e163932. doi: 10.1172/jci.insight.163932.
2022
Network Approaches for Charting the Transcriptomic and Epigenetic Landscape of the Developmental Origins of Health and Disease
Salvo Danilo Lombardo,
Ivan Fernando Wangsaputra,
Jörg Menche,
Adam Stevens.
Genes (Basel). 2022 Apr 26;13(5):764. doi: 10.3390/genes13050764.
2022
The regulatory network architecture of cardiometabolic diseases
Harald H H W Schmidt,
Jörg Menche.
Nat Genet. 2022 Jan;54(1):2-3. doi: 10.1038/s41588-021-00994-w.
2021
Hydrothermal polymerization of porous aromatic polyimide networks and machine learning-assisted computational morphology evolution interpretation.
Lahnsteiner M,
Caldera M,
Moura HM,
Cerrón-Infantes DA,
Roeser J,
Konegger T,
Thomas A,
Menche J,
Unterlass MM.
J Mater Chem A Mater. 2021 Sep 8;9(35):19754-19769. doi: 10.1039/d1ta01253c. eCollection 2021 Sep 14.
2021
Profiling biological perturbations with high-content imaging in single cells and heterogeneous populations.
Vulliard L,
Hancock J,
Kamnev A,
Fell CW,
Ferreira da Silva J,
Loizou JI,
Nagy V,
Dupré L,
Menche J.
jl: Profiling biological perturbations with high-content imaging in single cells and heterogeneous populations. Bioinformatics. 2021 Dec 22;38(6):1692-9. doi: 10.1093/bioinformatics/btab853. Online ahead of print.
2021
Discovering common pathogenetic processes between COVID-19 and diabetes mellitus by differential gene expression pattern analysis.
Rahman MR,
Islam T,
Shahjaman M,
Islam MR,
Lombardo SD,
Bramanti P,
Ciurleo R,
Bramanti A,
Tchorbanov A,
Fisicaro F,
Fagone P,
Nicoletti F,
Pennisi M.
Brief Bioinform. 2021 Nov 5;22(6):bbab262. doi: 10.1093/bib/bbab262.
2021
Morphological profiling of human T and NK lymphocytes by high-content cell imaging.
German Y,
Vulliard L,
Kamnev A,
Pfajfer L,
Huemer J,
Mautner AK,
Rubio A,
Kalinichenko A,
Boztug K,
Ferrand A,
Menche J,
Dupré L.
Cell Rep. 2021 Jul 6;36(1):109318. doi: 10.1016/j.celrep.2021.109318.
