2024

Take my breath away-mitochondrial dysfunction drives CD8+ T cell exhaustion

Felix Clemens Richter, Mariia Saliutina, Ahmed N Hegazy, Andreas Bergthaler.
Genes Immun. 2024 Feb;25(1):4-6. doi: 10.1038/s41435-023-00233-8. Epub 2024 Jan 22.
2023

A replicating LCMV-based vaccine for the treatment of solid tumors

Mette-Triin Purde, Jovana Cupovic, Yannick A Palmowski, Ahmad Makky, Sarah Schmidt, Alexander Rochwarger, Fabienne Hartmann, Felix Stemeseder, Alexander Lercher, Marie-Therese Abdou, David Bomze, Lenka Besse, Fiamma Berner, Thomas Tüting, Michael Hölzel, Andreas Bergthaler, Stefan Kochanek, Burkhard Ludewig, Henning Lauterbach, Klaus K Orlinger, Tobias Bald, Andrea Schietinger, Christian Schürch, Sandra S Ring, Lukas Flatz.
Mol Ther. 2024 Feb 7;32(2):426-439. doi: 10.1016/j.ymthe.2023.11.026. Epub 2023 Dec 5.
2023

Autoreactive T cells targeting type II pneumocyte antigens in COVID-19 convalescent patients

Christa Lichtensteiger, Maximilian Koblischke, Fiamma Berner, Ann-Kristin Jochum, Tobias Sinnberg, Beatrice Balciunaite, Mette-Triin Purde, Vincent Walter, Marie-Therese Abdou, Kathrin Hofmeister, Philipp Kohler, Pietro Vernazza, Werner C Albrich, Christian R Kahlert, Alexander Zoufaly, Marianna T Traugott, Lukas Kern, Urs Pietsch, Gian-Reto Kleger, Miodrag Filipovic, Manfred Kneilling, Antonio Cozzio, Oltin Pop, David Bomze, Andreas Bergthaler, Omar Hasan Ali, Judith Aberle, Lukas Flatz.
J Autoimmun. 2023 Nov;140:103118. doi: 10.1016/j.jaut.2023.103118. Epub 2023 Oct 10.
2023

You only waste twice: T cells in parasite-induced organ wasting

Felix Clemens Richter, Andreas Bergthaler.
Cell Rep. 2023 Aug 29;42(8):112829. doi: 10.1016/j.celrep.2023.112829. Epub 2023 Jul 24.
2023

WAVES (Web-based tool for Analysis and Visualization of Environmental Samples)-a web application for visualization of wastewater pathogen sequencing results

Petr Triska, Fabian Amman, Lukas Endler, Andreas Bergthaler.
Bioinformatics. 2023 Apr 3;39(4):btad160. doi: 10.1093/bioinformatics/btad160.
2022

VirPool: model-based estimation of SARS-CoV-2 variant proportions in wastewater samples

Askar Gafurov, Andrej Baláž, Fabian Amman, Kristína Boršová, Viktória Čabanová, Boris Klempa, Andreas Bergthaler, Tomáš Vinař, Broňa Brejová.
BMC Bioinformatics. 2022 Dec 19;23(1):551. doi: 10.1186/s12859-022-05100-3.
2022

Comparison of clinical characteristics among patients infected with alpha vs. delta SARS-CoV-2 variants

Benedikt Rumpf, Benno Lickefett, Clemens Baumgartner, Victoria Kauer, Mario Karolyi, Erich Pawelka, Tamara Seitz, Marianna Traugott, Petr Triska, Andreas Bergthaler, Hermann Laferl, Christoph Wenisch, Alexander Zoufaly.
Wien Klin Wochenschr. 2022 Dec;134(23-24):850-855. doi: 10.1007/s00508-022-02084-1. Epub 2022 Sep 7.
2022

Viral variant-resolved wastewater surveillance of SARS-CoV-2 at national scale

Fabian Amman, Rudolf Markt, Lukas Endler, Sebastian Hupfauf, Benedikt Agerer, Anna Schedl, Lukas Richter, Melanie Zechmeister, Martin Bicher, Georg Heiler, Petr Triska, Matthew Thornton, Thomas Penz, Martin Senekowitsch, Jan Laine, Zsofia Keszei, Peter Klimek, Fabiana Nägele, Markus Mayr, Beatrice Daleiden, Martin Steinlechner, Harald Niederstätter, Petra Heidinger, Wolfgang Rauch, Christoph Scheffknecht, Gunther Vogl, Günther Weichlinger, Andreas Otto Wagner, Katarzyna Slipko, Amandine Masseron, Elena Radu, Franz Allerberger, Niki Popper, Christoph Bock, Daniela Schmid, Herbert Oberacher, Norbert Kreuzinger, Heribert Insam, Andreas Bergthaler.
Nat Biotechnol. 2022 Dec;40(12):1814-1822. doi: 10.1038/s41587-022-01387-y. Epub 2022 Jul 18.
2021

The versatility of external quality assessment for the surveillance of laboratory and in vitro diagnostic performance: SARS-CoV-2 viral genome detection in Austria.

Buchta C, Camp JV, Jovanovic J, Chiba P, Puchhammer-Stöckl E, Mayerhofer M, Plicka H, Lercher A, Popa AM, Endler L, Bergthaler A, Huf W, Benka B, Delatour V, Müller MM, Griesmacher A, Aberle SW, Görzer I.
Clin Chem Lab Med. 2021 Jun 30;59(10):1735-1744. doi: 10.1515/cclm-2021-0604. Print 2021 Sep 27.
2021

Rapid, early and accurate SARS-CoV-2 detection using RT-qPCR in primary care: a prospective cohort study (REAP-1).

Leber W, Lammel O, Redlberger-Fritz M, Mustafa-Korninger ME, Glehr RC, Camp J, Agerer B, Lercher A, Popa A, Genger JW, Penz T, Aberle S, Bock C, Bergthaler A, Stiasny K, Hochstrasser EM, Hoellinger C, Siebenhofer A, Griffiths C, Panovska-Griffiths J.
BMJ Open. 2021 Aug 2;11(8):e045225. doi: 10.1136/bmjopen-2020-045225.