Groups
Pooled multicolour tagging for visualizing subcellular protein dynamics
Andreas Reicher, Jiří Reiniš, Maria Ciobanu, Pavel Růžička, Monika Malik, Marton Siklos, Victoria Kartysh, Tatjana Tomek, Anna Koren, André F Rendeiro, Stefan Kubicek.Nat Cell Biol. 2024 May;26(5):745-756. doi: 10.1038/s41556-024-01407-w. Epub 2024 Apr 19.
Abstract: https://pubmed.ncbi.nlm.nih.gov/38641660/
The evolution of metastatic upper tract urothelial carcinoma through genomic-transcriptomic and single-cell protein markers analysis
Kentaro Ohara, André Figueiredo Rendeiro, Bhavneet Bhinder, Kenneth Wha Eng, Hiranmayi Ravichandran, Duy Nguyen, David Pisapia, Aram Vosoughi, Evan Fernandez, Kyrillus S Shohdy, Jyothi Manohar, Shaham Beg, David Wilkes, Brian D Robinson, Francesca Khani, Rohan Bareja, Scott T Tagawa, Madhu M Ouseph, Andrea Sboner, Olivier Elemento, Bishoy M Faltas, Juan Miguel Mosquera.Nat Commun. 2024 Mar 18;15(1):2009. doi: 10.1038/s41467-024-46320-w.
Abstract: https://pubmed.ncbi.nlm.nih.gov/38499531/
Transcriptomic signatures of progressive and regressive liver fibrosis and portal hypertension
Oleksandr Petrenko, Philipp Königshofer, Ksenia Brusilovskaya, Benedikt S Hofer, Katharina Bareiner, Benedikt Simbrunner, Frank Jühling, Thomas F Baumert, Joachim Lupberger, Michael Trauner, Stefan G Kauschke, Larissa Pfisterer, Eric Simon, André F Rendeiro, Laura P M H de Rooij, Philipp Schwabl, Thomas Reiberger.iScience. 2024 Feb 20;27(3):109301. doi: 10.1016/j.isci.2024.109301. eCollection 2024 Mar 15.
Abstract: https://pubmed.ncbi.nlm.nih.gov/38469563/
Navigating the thymic landscape through development: from cellular atlas to tissue cartography
Dörte Symmank, Felix Clemens Richter, André F Rendeiro.Genes Immun. 2024 Apr;25(2):102-104. doi: 10.1038/s41435-024-00257-8. Epub 2024 Feb 10.
Abstract: https://pubmed.ncbi.nlm.nih.gov/38341523/
Mapping human natural killer cell development in pediatric tonsil by imaging mass cytometry and high-resolution microscopy
Everardo Hegewisch-Solloa, Janine E Melsen, Hiranmayi Ravichandran, André F Rendeiro, Aharon G Freud, Bethany Mundy-Bosse, Johannes C Melms, Shira E Eisman, Benjamin Izar, Eli Grunstein, Thomas J Connors, Olivier Elemento, Amir Horowitz, Emily M Mace.bioRxiv [Preprint]. 2023 Sep 6:2023.09.05.556371. doi: 10.1101/2023.09.05.556371.
Abstract: https://pubmed.ncbi.nlm.nih.gov/37732282/
Spatial omics technologies at multimodal and single cell/subcellular level
Jiwoon Park, Junbum Kim, Tyler Lewy, Charles M Rice, Olivier Elemento, André F Rendeiro, Christopher E Mason.Genome Biol. 2022 Dec 13;23(1):256. doi: 10.1186/s13059-022-02824-6.
Abstract: https://pubmed.ncbi.nlm.nih.gov/36514162/
Persistent alveolar type 2 dysfunction and lung structural derangement in post-acute COVID-19
André F Rendeiro, Hiranmayi Ravichandran, Junbum Kim, Alain C Borczuk, Olivier Elemento, Robert E Schwartz.medRxiv. 2022 Nov 29:2022.11.28.22282811. doi: 10.1101/2022.11.28.22282811. Preprint.
Abstract: https://pubmed.ncbi.nlm.nih.gov/36482970/
Author Correction: Unsupervised discovery of tissue architecture in multiplexed imaging
Junbum Kim, Samir Rustam, Juan Miguel Mosquera, Scott H Randell, Renat Shaykhiev, André F Rendeiro, Olivier Elemento.Nat Methods. 2022 Dec;19(12):1662. doi: 10.1038/s41592-022-01717-7.
Abstract: https://pubmed.ncbi.nlm.nih.gov/36414761/
Unsupervised discovery of tissue architecture in multiplexed imaging
Junbum Kim, Samir Rustam, Juan Miguel Mosquera, Scott H Randell, Renat Shaykhiev, André F Rendeiro, Olivier Elemento.Nat Methods. 2022 Dec;19(12):1653-1661. doi: 10.1038/s41592-022-01657-2. Epub 2022 Oct 31.
Abstract: https://pubmed.ncbi.nlm.nih.gov/36316562/