Publications
2019
The Airn lncRNA does not require any DNA elements within its locus to silence distant imprinted genes.
Andergassen D,
Muckenhuber M,
Bammer PC,
Kulinski TM,
Theussl HC,
Shimizu T,
Penninger JM,
Pauler FM,
Hudson QJ.
PLoS Genet. 2019 Jul 22;15(7):e1008268. doi: 10.1371/journal.pgen.1008268.
2018
Norepinephrine triggers an immediate-early regulatory network response in primary human white adipocytes.
Higareda-Almaraz JC,
Karbiener M,
Giroud M,
Pauler FM,
Gerhalter T,
Herzig S,
Scheideler M.
BMC Genomics. 2018 Nov 3;19(1):794. doi: 10.1186/s12864-018-5173-0.
2017
Artemisinins Target GABAA Receptor Signaling and Impair α Cell Identity.
Li J,
Casteels T,
Frogne T,
Ingvorsen C,
Honoré C,
Courtney M,
Huber KV,
Schmitner N,
Kimmel RA,
Romanov RA,
Sturtzel C,
Lardeau CH,
Klughammer J,
Farlik M,
Sdelci S,
Vieira A,
Avolio F,
Briand F,
Baburin I,
Májek P,
Pauler FM,
Penz T,
Stukalov A,
Gridling M,
Parapatics K,
Barbieux C,
Berishvili E,
Spittler A,
Colinge J,
Bennett KL,
Hering S,
Sulpice T,
Bock C,
Distel M,
Harkany T,
Meyer D,
Superti-Furga G,
Collombat P,
Hecksher-Sørensen J,
Kubicek S.
Cell. 2017 Jan 12;168(1-2):86-100.e15. doi: 10.1016/j.cell.2016.11.010. Epub 2016 Dec 1.
2017
Mapping the mouse Allelome reveals tissue-specific regulation of allelic expression.
Andergassen D,
Dotter CP,
Wenzel D,
Sigl V,
Bammer PC,
Muckenhuber M,
Mayer D,
Kulinski TM,
Theussl HC,
Penninger JM,
Bock C,
Barlow DP,
Pauler FM,
Hudson QJ.
Elife. 2017 Aug 14;6. pii: e25125. doi: 10.7554/eLife.25125.
2016
A human haploid gene trap collection to study lncRNAs with unusual RNA biology.
Kornienko AE,
Vlatkovic I,
Neesen J,
Barlow DP,
Pauler FM.
RNA Biol. 2016 Feb;13(2):196-220. doi: 10.1080/15476286.2015.1110676.
2016
Long non-coding RNAs display higher natural expression variation than protein-coding genes in healthy humans.
Kornienko AE,
Dotter CP,
Guenzl PM,
Gisslinger H,
Gisslinger B,
Cleary C,
Kralovics R,
Pauler FM,
Barlow DP.
Genome Biol. 2016 Jan 29;17(1):14. doi: 10.1186/s13059-016-0873-8.
2015
A human haploid gene trap collection to study lncRNAs with unusual RNA biology.
Kornienko AE,
Vlatkovic I,
Neesen J,
Barlow DP,
Pauler FM.
RNA Biol. 2015 Dec 15:0.
2015
Allelome.PRO, a pipeline to define allele-specific genomic features from high-throughput sequencing data.
Andergassen D,
Dotter CP,
Kulinski TM,
Guenzl PM,
Bammer PC,
Barlow DP,
Pauler FM,
Hudson QJ.
Nucleic Acids Res. 2015 Dec 2;43(21):e146. doi: 10.1093/nar/gkv727. Epub 2015 Jul 21.
2015
Imprinted expression in cystic embryoid bodies shows an embryonic and not an extra-embryonic pattern.
Kulinski TM,
Casari MR,
Guenzl PM,
Wenzel D,
Andergassen D,
Hladik A,
Datlinger P,
Farlik M,
Theussl HC,
Penninger JM,
Knapp S,
Bock C,
Barlow DP,
Hudson QJ.
Dev Biol. 2015 Jun 15;402(2):291-305. doi: 10.1016/j.ydbio.2015.04.010. Epub 2015 Apr 24.
2014
Considerations when investigating lncRNA function in vivo.
Bassett AR,
Akhtar A,
Barlow DP,
Bird AP,
Brockdorff N,
Duboule D,
Ephrussi A,
Ferguson-Smith AC,
Gingeras TR,
Haerty W,
Higgs DR,
Miska EA,
Ponting CP.
Elife. 2014 Aug 14;3:e03058. doi: 10.7554/eLife.03058.
